| VA | From | Airport | To | Destination | Type | Distance miles | Frequency | Competitors | |
|---|---|---|---|---|---|---|---|---|---|
| AAW | PJON | Johnston I - Johnston Atoll | KCID | Cedar Rapids - The Eastern Iowa Airport | Long | 4198.0 | 1 | ||
| AAW | PJON | Johnston I - Johnston Atoll | YBDV | Birdsville | Long | 3928.6 | 0 | ||
| CIF | PJON | Johnston I - Johnston Atoll | YPCC | Cocos I Intl | Long | 5813.9 | 1 | ||
| CIF | PJON | Johnston I - Johnston Atoll | LFPG | Paris - Charles-De-Gaulle | Long | 6833.0 | 0 | ||
| EVO | PJON | Johnston I - Johnston Atoll | VHHX | Hong Kong Intl (old) | Long | 4281.3 | 0 | ||
| FAA | PJON | Johnston I - Johnston Atoll | PHNG | Mokapu - Kaneohe Bay MCAF | Regional | 724.3 | 0 | ||
| FAA | PJON | Johnston I - Johnston Atoll | KNKX | San Diego - Miramar MCAS/Mitscher | Medium | 2980.6 | 0 | ||
| FAA | PJON | Johnston I - Johnston Atoll | RPLL | Manila - Ninoy Aquino Intl | Long | 3994.5 | 0 | ||
| FAA | PJON | Johnston I - Johnston Atoll | PWAK | Wake I AAF | Medium | 1366.9 | 0 | ||
| PIA | PJON | Johnston I - Johnston Atoll | KAEG | Albuquerque - Double Eagle Ii | Long | 3502.4 | 0 |