| VA | From | Airport | To | Destination | Type | Distance miles | Frequency | Competitors | |
|---|---|---|---|---|---|---|---|---|---|
| AAA | RPML | Cagayan De Oro | RPMD | Davao - Bangoy Intl | Local | 98.9 | 1 | ||
| AAA | RPML | Cagayan De Oro | RPLL | Manila - Ninoy Aquino Intl | Local | 422.4 | 0 | ||
| CIF | RPML | Cagayan De Oro | NFTF | Nukualofa - Fuaamotu Intl | Long | 3968.4 | 0 | ||
| CIF | RPML | Cagayan De Oro | LFPG | Paris - Charles-De-Gaulle | Long | 6211.9 | 1 |